Publications by GMB Students

Publications on which a GMB student was first or co-first author (indicated by *) are listed below.
All GMB student authors are highlighted.

2018

• M.M. Brady, S. McMahan, and J. Sekelsky (2018). Loss of Drosophila Mei-41/ATR alters meiotic crossover patterning. Genetics 208: 579-588. doi: 10.1534/genetics.117.300634.
• K.M. Gray, K.A. Kaifer, D. Baillat, Y. Wen, T.R. Bonacci, A.D. Ebert, A.C. Raimer, A.M. Spring, S.T. Have, J.J. Glascock, K. Gupta, G.D. Van Duyne, M.J. Emanuele, A.I. Lamond, E.J. Wagner, C.L. Lorson, and A.G. Matera (2018). Self-oligomerization regulates stability of survival motor neuron protein isoforms by sequestering an SCF(Slmb) degron. Mol Biol Cell 29: 96-110. doi: 10.1091/mbc.E17-11-0627.
• T.J.R. PenkeT, D.J. McKay, B.D. Strahl, A.G. Matera, and R.J. Duronio (2018). Functional redundancy of variant and canonical histone H3 lysine 9 modification in Drosophila. Genetics 208: 229-244. doi: 10.1534/genetics.117.300480.

2017

• B.H. Albright, C.M. Storey, G. Murlidharan, R.M. Castellanos Rivera, G.E. Berry, V.J. Madigan, and A. Asokan (2017). Mapping the structural determinants required for AAVrh.10 transport across the blood-brain barrier. Mol Ther doi: 10.1016/j.ymthe.2017.10.017.
• R. Beck, M. Styblo, and P. Sethupathy (2017). Arsenic exposure and Type 2 diabetes: microRNAs as mechanistic links? Curr Diab Rep 17: 18. doi: 10.1007/s11892-017-0845-8.
• S.P. Bellendir*, D.J. Rognstad*, L.P. Morris, G. Zapotoczny, W.G. Walton, M.R. Redinbo, D.A. Ramsden, J. Sekelsky, and D.A. Erie (2017). Substrate preference of Gen endonucleases highlights the importance of branched structures as DNA damage repair intermediates. Nucleic Acids Res 45: 5333-5348. doi: 10.1093/nar/gkx214.
• R.L. Bigler, J.W. Kamande, R. Dumitru, M. Niedringhaus, and A.M. Taylor (2017). Messenger RNAs localized to distal projections of human stem cell derived neurons. Sci Rep 7: 611. doi: 10.1038/s41598-017-00676-w.
• E.K. Borchardt, R.M. Meganck, H.A. Vincent, C.B. Ball, S.B.V. Ramos, N.J. Moorman, W.F. Marzluff, and A. Asokan (2017). Inducing circular RNA formation using the CRISPR endoribonuclease Csy4. RNA 23: 619-627. doi: 10.1261/rna.056838.116.
• D.C. Chong, Z. Yu, H.E. Brighton, J.E. Bear, and V.L. Bautch (2017). Tortuous microvessels contribute to wound healing via sprouting angiogenesis. Arterioscler Thromb Vasc Biol 37: 1903-1912. doi: 10.1161/ATVBAHA.117.309993.
• A.R. Coffey, T.L. Smallwood, J. Albright, K. Hua, M. Kanke, D. Pomp, B.J. Bennett, and P. Sethupathy (2017). Systems genetics identifies a co-regulated module of liver microRNAs associated with plasma LDL cholesterol in murine diet-induced dyslipidemia. Physiol Genomics 49: 618-629. doi: 10.1152/physiolgenomics.00050.2017.
• M.P. Conlin, D.A. Reid, G.W. Small, H.H. Chang, G. Watanabe, M.R. Lieber, D.A. Ramsden, and E. Rothenberg (2017). DNA ligase IV guides end-processing choice during nonhomologous end joining. Cell Rep 20: 2810-2819. doi: 10.1016/j.celrep.2017.08.091.
• T.A. Dinh, E.C. Vitucci, E. Wauthier, R.P. Graham, W.A. Pitman, T. Oikawa, M. Chen, G.O. Silva, K.G. Greene, M.S. Torbenson, L.M. Reid, and P. Sethupathy (2017). Comprehensive analysis of The Cancer Genome Atlas reveals a unique gene and non-coding RNA signature of fibrolamellar carcinoma. Sci Rep 7: 44653. doi: 10.1038/srep44653.
• L.J. Donoghue, A. Livraghi-Butrico, K.M. McFadden, J.M. Thomas, G. Chen, B.R. Grubb, W.K. O’Neal, R.C. Boucher, and S.N.P. Kelada (2017). Identification of trans protein QTL for secreted airway mucins in mice and a causal role for Bpifb1. Genetics 207: 801-812. doi: 10.1534/genetics.117.300211.
• J.K. Durand and A.S. Baldwin (2017). Targeting IKK and NF-kappaB for therapy. Adv Protein Chem Struct Biol 107: 77-115. doi: 10.1016/bs.apcsb.2016.11.006.
• A. Emery, S. Zhou, E. Pollom, and R. Swanstrom (2017). Characterizing HIV-1 splicing by using next-generation sequencing. J Virol 91: doi: 10.1128/JVI.02515-16.
• C.C. Fahey and I.J. Davis (2017). SETting the stage for cancer development: SETD2 and the consequences of lost methylation. Cold Spring Harb Perspect Med 7: doi: 10.1101/cshperspect.a026468.
• L. Freeman, H. Guo, C.N. David, W.J. Brickey, S. Jha, and J.P. Ting (2017). NLR members NLRC4 and NLRP3 mediate sterile inflammasome activation in microglia and astrocytes. J Exp Med 214: 1351-1370. doi: 10.1084/jem.20150237.
• M.A. Hartmann and J. Sekelsky (2017). The absence of crossovers on chromosome 4 in Drosophila melanogaster: Imperfection or interesting exception? Fly (Austin) 11: 253-259. doi: 10.1080/19336934.2017.1321181.
• T. Hatkevich and J. Sekelsky (2017). Bloom syndrome helicase in meiosis: Pro-crossover functions of an anti-crossover protein. Bioessays 39: doi: 10.1002/bies.201700073.
• T. Hatkevich*, K.P. Kohl*, S. McMahan, M.A. Hartmann, A.M. Williams, and J. Sekelsky (2017). Bloom Syndrome Helicase Promotes Meiotic Crossover Patterning and Homolog Disjunction. Curr Biol 27: 96-102. doi: 10.1016/j.cub.2016.10.055.
• C. Hodgens, Z.L. Nimchuk, and J.J. Kieber (2017). indCAPS: A tool for designing screening primers for CRISPR/Cas9 mutagenesis events. PLoS One 12: e0188406. doi: 10.1371/journal.pone.0188406.
• J.K. Holsclaw and J. Sekelsky (2017). Annealing of Complementary DNA Sequences During Double-Strand Break Repair in Drosophila Is Mediated by the Ortholog of SMARCAL1. Genetics 206: 467-480. doi: 10.1534/genetics.117.200238.
• D.M. Irvin, R.S. McNeill, R.E. Bash, and C.R. Miller (2017). Intrinsic Astrocyte Heterogeneity Influences Tumor Growth in Glioma Mouse Models. Brain Pathol 27: 36-50. doi: 10.1111/bpa.12348.
• S.L. McDaniel, A.J. Hepperla, J. Huang, R. Dronamraju, A.T. Adams, V.G. Kulkarni, I.J. Davis, and B.D. Strahl (2017). H3K36 methylation regulates nutrient stress response in Saccharomyces cerevisiae by enforcing transcriptional fidelity. Cell Rep 19: 2371-2382. doi: 10.1016/j.celrep.2017.05.057.
• S.L. McDaniel and B.D. Strahl (2017). Shaping the cellular landscape with Set2/SETD2 methylation. Cell Mol Life Sci doi: 10.1007/s00018-017-2517-x.
• M.P. Meers, T. Henriques, C.A. Lavender, D.J. McKay, B.D. Strahl, R.J. Duronio, K. Adelman, and A.G. Matera (2017). Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity. Elife 6: doi: 10.7554/eLife.23249.
• J.H. Meserve and R.J. Duronio (2017). A population of G2-arrested cells are selected as sensory organ precursors for the interommatidial bristles of the Drosophila eye. Dev Biol 430: 374-384. doi: 10.1016/j.ydbio.2017.06.023.
• .E. NesmithJ, J.C. Chappell, J.G. Cluceru, and V.L. Bautch (2017). Blood vessel anastomosis is spatially regulated by Flt1 during angiogenesis. Development 144: 889-896. doi: 10.1242/dev.145672.
• J.J. Noto, C.A. Schmidt, and A.G. Matera (2017). Engineering and expressing circular RNAs via tRNA splicing. RNA Biol 1-7. doi: 10.1080/15476286.2017.1317911.
• C.M. Parobek, J.B. Parr, N.F. Brazeau, C. Lon, S. Chaorattanakawee, P. Gosi, E.J. Barnett, L.D. Norris, S.R. Meshnick, M.D. Spring, C.A. Lanteri, J.A. Bailey, D.L. Saunders, J.T. Lin, and J.J. Juliano (2017). Partner-drug resistance and population substructuring of artemisinin-resistant Plasmodium falciparum in Cambodia. Genome Biol Evol 9: 1673-1686. doi: 10.1093/gbe/evx126.
• C.M. Parobek, F.I. Archer, M.E. DePrenger-Levin, S.M. Hoban, L. Liggins, and A.E. Strand (2017). skelesim: an extensible, general framework for population genetic simulation in R. Mol Ecol Resour 17: 101-109. doi: 10.1111/1755-0998.12607.
• B.C. Peck, A.T. Mah, W.A. Pitman, S. Ding, P.K. Lund, and P. Sethupathy (2017). Functional Transcriptomics in Diverse Intestinal Epithelial Cell Types Reveals Robust MicroRNA Sensitivity in Intestinal Stem Cells to Microbial Status. J Biol Chem 292: 2586-2600. doi: 10.1074/jbc.M116.770099.
• M.I. Pronobis, N. Deuitch, V. Posham, Y. Mimori-Kiyosue, and M. Peifer (2017). Reconstituting regulation of the canonical Wnt pathway by engineering a minimal beta-catenin destruction machine. Mol Biol Cell 28: 41-53. doi: 10.1091/mbc.E16-07-0557.
• A.C. Raimer, K.M. Gray, and A.G. Matera (2017). SMN – A chaperone for nuclear RNP social occasions? RNA Biol 14: 701-711. doi: 10.1080/15476286.2016.1236168.
• K. Rehain-Bell, A. Love, M.E. Werner, I. MacLeod, J.R. Yates, 3rd, and A.S. Maddox (2017). A Sterile 20 Family Kinase and Its Co-factor CCM-3 Regulate Contractile Ring Proteins on Germline Intercellular Bridges. Curr Biol 27: 860-867. doi: 10.1016/j.cub.2017.01.058.
• S.W. Renner, L.M. Walker, L.J. Forsberg, J.Z. Sexton, and J.E. Brenman (2017). Carbonic anhydrase III (Car3) is not required for fatty acid synthesis and does not protect against high-fat diet induced obesity in mice. PLoS One 12: e0176502. doi: 10.1371/journal.pone.0176502.
• T.S. Roman, M.E. Cannon, S. Vadlamudi, M.L. Buchkovich, B.N. Wolford, R.P. Welch, M.A. Morken, G.J. Kwon, A. Varshney, R. Kursawe, Y. Wu, A.U. Jackson, P. National Institutes of Health Intramural Sequencing Center Comparative Sequencing, M.R. Erdos, J. Kuusisto, M. Laakso, L.J. Scott, M. Boehnke, F.S. Collins, S.C.J. Parker, M.L. Stitzel, and K.L. Mohlke (2017). A Type 2 Diabetes-Associated Functional Regulatory Variant in a Pancreatic Islet Enhancer at the ADCY5 Locus. Diabetes 66: 2521-2530. doi: 10.2337/db17-0464.
• L. Smith and P.S. Maddox (2017). Reading the centromere epigenetic mark. Dev Cell 42: 110-112. doi: 10.1016/j.devcel.2017.07.011.
• N.R. Tackmann and Y. Zhang (2017). Mouse modelling of the MDM2/MDMX-p53 signalling axis. J Mol Cell Biol 9: 34-44. doi: 10.1093/jmcb/mjx006.
• C.M. Uyehara*, S.L. Nystrom*, M.J. Niederhuber, M. Leatham-Jensen, Y. Ma, L.A. Buttitta, and D.J. McKay (2017). Hormone-dependent control of developmental timing through regulation of chromatin accessibility. Genes Dev doi: 10.1101/gad.298182.117.
• M. Vitucci*, D.M. Irvin*, R.S. McNeill, R.S. Schmid, J.M. Simon, H.D. Dhruv, M.B. Siegel, A.M. Werneke, R.E. Bash, S. Kim, M.E. Berens, and C.R. Miller (2017). Genomic profiles of low-grade murine gliomas evolve during progression to glioblastoma. Neuro Oncol doi: 10.1093/neuonc/nox050.
• G. Zapotoczny and J. Sekelsky (2017). Human Cell Assays for Synthesis-Dependent Strand Annealing and Crossing over During Double-Strand Break Repair. G3 (Bethesda) 7: 1191-1199. doi: 10.1534/g3.116.037390.

2016

• G.E. Berry and A. Asokan (2016). Chemical modulation of endocytic sorting augments adeno-associated viral transduction. J Biol Chem 291: 939-47.
• G.E. Berry and A. Asokan (2016). Cellular transduction mechanisms of adeno-associated viral vectors. Curr Opin Virol 21: 54-60.
• L.C. Freeman and J.P. Ting (2016). The pathogenic role of the inflammasome in neurodegenerative diseases. J Neurochem 136 Suppl 1: 29-38.
• Y. Gao*, E. Mutter-Rottmayer*, A.M. Greenwalt*, D. Goldfarb, F. Yan, Y. Yang, R.C. Martinez-Chacin, K.H. Pearce, S. Tateishi, M.B. Major, and C. Vaziri (2016). A neomorphic cancer cell-specific role of MAGE-A4 in trans-lesion synthesis. Nat Commun 7: 12105.
• N.C. Gomez, A.J. Hepperla, R. Dumitru, J.M. Simon, F. Fang, and I.J. Davis (2016). Widespread chromatin accessibility at repetitive elements links stem cells with human cancer. Cell Rep 17: 1607-1620.
• K.E. Hacker*, C.C. Fahey*, S.A. Shinsky*, Y.J. Chiang*, J.V. DiFiore*, D.K. Jha, A.H. Vo, J.A. Shavit, I.J. Davis, B.D. Strahl, and W.K. Rathmell (2016). Structure/function analysis of recurrent mutations in SETD2 protein reveals a critical and conserved role for a SET domain residue in maintaining protein stability and histone H3 Lys-36 trimethylation. J Biol Chem 291: 21283-21295.
• T.K. Hayes, N.F. Neel, C. Hu, P. Gautam, M. Chenard, B. Long, M. Aziz, M. Kassner, K.L. Bryant, M. Pierobon, R. Marayati, S. Kher, S.D. George, M. Xu, A. Wang-Gillam, A.A. Samatar, A. Maitra, K. Wennerberg, E.F. Petricoin, 3rd, H.H. Yin, B. Nelkin, A.D. Cox, J.J. Yeh, and C.J. Der (2016). Long-term ERK inhibition in KRAS-mutant pancreatic cancer is associated with MYC degradation and senescence-like growth suppression. Cancer Cell 29: 75-89.
• M.D. Iglesia, J.S. Parker, K.A. Hoadley, J.S. Serody, C.M. Perou, and B.G. Vincent (2016). Genomic analysis of immune cell infiltrates across 11 tumor types. J Natl Cancer Inst 108:
• M.R. Irvin, D.M. Rotroff, S. Aslibekyan, D. Zhi, B. Hidalgo, A. Motsinger-Reif, S. Marvel, V. Srinivasasainagendra, S.A. Claas, J.B. Buse, R.J. Straka, J.M. Ordovas, I.B. Borecki, X. Guo, I.Y. Chen, J.I. Rotter, M.J. Wagner, and D.K. Arnett (2016). A genome-wide study of lipid response to fenofibrate in Caucasians: a combined analysis of the GOLDN and ACCORD studies. Pharmacogenet Genomics 26: 324-33.
• P.L. Leslie and Y. Zhang (2016). MDM2 oligomers: antagonizers of the guardian of the genome. Oncogene
• V.J. Madigan and A. Asokan (2016). Engineering AAV receptor footprints for gene therapy. Curr Opin Virol 18: 89-96.
• X. Meng*, N.R. Tackmann*, S. Liu, J. Yang, J. Dong, C. Wu, A.D. Cox, and Y. Zhang (2016). RPL23 links oncogenic RAS signaling to p53-mediated tumor suppression. Cancer Res 76: 5030-9.
• C.J. Miller and D.R. Matute (2016). The effect of temperature on Drosophila hybrid fitness. G3 (Bethesda)
• C.J. Miller and D.R. Matute (2016). Evolutionary genetics: reuse, recycle, converge. Curr Biol 26: R838-40.
• G. Murlidharan, A. Crowther, R.A. Reardon, J. Song, and A. Asokan (2016). Glymphatic fluid transport controls paravascular clearance of AAV vectors from the brain. JCI Insight 1: e88034.
• G. Murlidharan, K. Sakamoto, L. Rao, T. Corriher, D. Wang, G. Gao, P. Sullivan, and A. Asokan (2016). CNS-restricted transduction and CRISPR/Cas9-mediated gene deletion with an engineered AAV vector. Mol Ther Nucleic Acids 5: e338.
• C.M. Parobek, J.T. Lin, D.L. Saunders, E.J. Barnett, C. Lon, C.A. Lanteri, S. Balasubramanian, N. Brazeau, D.K. DeConti, D.L. Garba, S.R. Meshnick, M.D. Spring, C.M. Chuor, J.A. Bailey, and J.J. Juliano (2016). Selective sweep suggests transcriptional regulation may underlie Plasmodium vivax resilience to malaria control measures in Cambodia. Proc Natl Acad Sci U S A 113: E8096-E8105.
• B.C. Peck, J. Sincavage, S. Feinstein, A.T. Mah, J.G. Simmons, P.K. Lund, and P. Sethupathy (2016). miR-30 family controls proliferation and differentiation of intestinal epithelial cell models by directing a broad gene expression program that includes SOX9 and the ubiquitin ligase pathway. J Biol Chem
• T.J. Penke, D.J. McKay, B.D. Strahl, A.G. Matera, and R.J. Duronio (2016). Direct interrogation of the role of H3K9 in metazoan heterochromatin function. Genes Dev 30: 1866-80.
• P.N. Pozo and J.G. Cook (2016). Regulation and function of Cdt1; A key factor in cell proliferation and genome stability. Genes (Basel) 8: doi: 10.3390/genes8010002.
• M.I. Pronobis, N. Deuitch, and M. Peifer (2016). The Miraprep: A protocol that uses a miniprep kit and provides maxiprep yields. PLoS One 11: e0160509.
• N.E. Romero, S.W. Matson, and J. Sekelsky (2016). Biochemical activities and genetic functions of the Drosophila melanogaster Fancm helicase in DNA repair. Genetics 204: 531-541.
• J.S. Runge, J.R. Raab, and T. Magnuson (2016). Epigenetic regulation by ATP-dependent chromatin-remodeling enzymes: SNF-ing out crosstalk. Curr Top Dev Biol 117: 1-13.
• C.A. Schmidt, J.J. Noto, G.S. Filonov, and A.G. Matera (2016). A method for expressing and imaging abundant, stable, circular RNAs in vivo using tRNA splicing. Methods Enzymol 572: 215-36.
• D.W. Serber, J.S. Runge, D.U. Menon, and T. Magnuson (2016). The Mouse INO80 chromatin-remodeling complex is an essential meiotic factor for spermatogenesis. Biol Reprod 94: 8.
• L.C. Tsao, H. Guo, J. Jeffrey, J.A. Hoxie, and L. Su (2016). CCR5 interaction with HIV-1 Env contributes to Env-induced depletion of CD4 T cells in vitro and in vivo. Retrovirology 13: 22.
• L. Waldron, J.D. Steimle, T.M. Greco, N.C. Gomez, K.M. Dorr, J. Kweon, B. Temple, X.H. Yang, C.M. Wilczewski, I.J. Davis, I.M. Cristea, I.P. Moskowitz, and F.L. Conlon (2016). The cardiac TBX5 interactome reveals a chromatin remodeling network essential for cardiac septation. Dev Cell 36: 262-75.
• A.O. Whitlock, K.M. Peck, R.B. Azevedo, and C.L. Burch (2016). An evolving genetic architecture interacts with Hill-Robertson interference to determine the benefit of sex. Genetics 203: 923-36.
• D.W. Wyatt, W. Feng, M.P. Conlin, M.J. Yousefzadeh, S.A. Roberts, P. Mieczkowski, R.D. Wood, G.P. Gupta, and D.A. Ramsden (2016). Essential roles for polymerase theta-mediated end joining in the repair of chromosome breaks. Mol Cell 63: 662-73.

2015

• E.K. Borchardt, L.A. Vandoros, M. Huang, P.E. Lackey, W.F. Marzluff, and A. Asokan (2015). Controlling mRNA stability and translation with the CRISPR endoribonuclease Csy4. RNA 21: 1921-30.
• M.S. Charpentier, P. Tandon, C.E. Trincot, E.K. Koutleva, and F.L. Conlon (2015). A distinct mechanism of vascular lumen formation in Xenopus requires EGFL7. PLoS One 10: e0116086.
• K.M. Dorr, N.M. Amin, L.M. Kuchenbrod, H. Labiner, M.S. Charpentier, L.H. Pevny, A. Wessels, and F.L. Conlon (2015). Casz1 is required for cardiomyocyte G1-to-S phase progression during mammalian cardiac development. Development 142: 2037-47.
• N.C. Gomez and I.J. Davis (2015). Linking germline and somatic variation in Ewing sarcoma. Nature Genetics 47: 964-5.
• H. Kanamori*, C.M. Parobek*, D.J. Weber, D. van Duin, W.A. Rutala, B.A. Cairns, and J.J. Juliano (2015). Next-generation sequencing and comparative analysis of sequential outbreaks caused by multidrug-resistant Acinetobacter baumannii at a large academic burn center. Antimicrob Agents Chemother
• O. Karginova*, M.B. Siegel*, A.E. Van Swearingen, A.M. Deal, B. Adamo, M.J. Sambade, S. Bazyar, N. Nikolaishvili-Feinberg, R. Bash, S. O’Neal, K. Sandison, J.S. Parker, C. Santos, D. Darr, W. Zamboni, Y.Z. Lee, C.R. Miller, and C.K. Anders (2015). Efficacy of carboplatin alone and in combination with ABT888 in intracranial murine models of BRCA-mutated and BRCA-wild-type triple-negative breast cancer. Molecular Cancer Therapy 14: 920-30.
• L.E. Leopold, B.N. Heestand, S. Seong, L. Shtessel, and S. Ahmed (2015). Lack of pairing during meiosis triggers multigenerational transgene silencing in Caenorhabditis elegans. Proc Natl Acad Sci U S A 112: E2667-76.
• P.L. Leslie, H. Ke, and Y. Zhang (2015). The MDM2 RING Domain and Central Acidic Domain Play Distinct Roles in MDM2 Protein Homodimerization and MDM2-MDMX Protein Heterodimerization. J Biol Chem 290: 12941-50.
• J.H. Meserve and R.J. Duronio (2015). Scalloped and Yorkie are required for cell cycle re-entry of quiescent cells after tissue damage. Development 142: 2740-51.
• G. Murlidharan, T. Corriher, H.T. Ghashghaei, and A. Asokan (2015). Unique glycan signatures regulate adeno-associated virus tropism in the developing brain. J Virol 89: 3976-87.
• B.C. Peck, M. Weiser, S.E. Lee, G.R. Gipson, V.B. Iyer, R.B. Sartor, H.H. Herfarth, M.D. Long, J.J. Hansen, K.L. Isaacs, D.G. Trembath, R. Rahbar, T.S. Sadiq, T.S. Furey, P. Sethupathy, and S.Z. Sheikh (2015). MicroRNAs classify different disease behavior phenotypes of Crohn’s disease and may have prognostic utility. Inflamm Bowel Dis 21: 2178-87.
• K. Rehain and A.S. Maddox (2015). Neuron migration: anillin protects leading edge actin. Curr Biol 25: R423-5.
• L.F. Rizzardi, K.E. Coleman, D. Varma, J.P. Matson, S. Oh, and J.G. Cook (2015). CDK1-dependent inhibition of the E3 ubiquitin ligase CRL4CDT2 ensures robust transition from S phase to mitosis. J Biol Chem 290: 556-67.
• T.S. Roman, A.F. Marvelle, M.P. Fogarty, S. Vadlamudi, A.J. Gonzalez, M.L. Buchkovich, J.R. Huyghe, C. Fuchsberger, A.U. Jackson, Y. Wu, M. Civelek, A.J. Lusis, K.J. Gaulton, P. Sethupathy, A.J. Kangas, P. Soininen, M. Ala-Korpela, J. Kuusisto, F.S. Collins, M. Laakso, M. Boehnke, and K.L. Mohlke (2015). Multiple hepatic regulatory variants at the GALNT2 GWAS locus associated with high-density lipoprotein cholesterol. Am J Hum Genet 97: 801-15.
• E.A. Terzo, S.M. Lyons, J.S. Poulton, B.R. Temple, W.F. Marzluff, and R.J. Duronio (2015). Distinct self-interaction domains promote Multi Sex Combs accumulation in and formation of the Drosophila histone locus body. Mol Biol Cell 26: 1559-74.

2014

• A. Arreola, C.L. Cowey, J.L. Coloff, J.C. Rathmell, and W.K. Rathmell (2014). HIF1alpha and HIF2alpha exert distinct nutrient preferences in renal cells. PLoS One 9: e98705.
• B.D. Bower and J.D. Griffith (2014). TRF1 and TRF2 differentially modulate Rad51-mediated telomeric and nontelomeric displacement loop formation in vitro. Biochemistry (Aug 21 epub).
• M.S. Charpentier and F.L. Conlon (2014). Cellular and molecular mechanisms underlying blood vessel lumen formation. Bioessays 36: 251-259.
• J.S. Damrauer, K.A. Hoadley, D.D. Chism, C. Fan, C.J. Tiganelli, S.E. Wobker, J.J. Yeh, M.I. Milowsky, G. Iyer, J.S. Parker, and W.Y. Kim (2014). Intrinsic subtypes of high-grade bladder cancer reflect the hallmarks of breast cancer biology. Proc Natl Acad Sci USA 111: 3110-3115.
• B. Zhou*, J.S. Damrauer*, S.T. Bailey, T. Hadzic, Y. Jeong, K. Clark, C. Fan, L. Murphy, C.Y. Lee, M.A. Troester, C.R. Miller, J. Jin, D. Darr, C.M. Perou, R.L. Levine, M. Diehn, and W.Y. Kim (2014). Erythropoietin promotes breast tumorigenesis through tumor-initiating cell self-renewal. J Clin Invest 124: 553-63.
• J. Ellis, E.M. Lange, J. Li, J. Dupuis, J. Baumert, J.D. Walston, B.J. Keating, P. Durda, E.R. Fox, C.D. Palmer, Y.A. Meng, T. Young, D.N. Farlow, R.B. Schnabel, C.S. Marzi, E. Larkin, L.W. Martin, J.C. Bis, P. Auer, V.S. Ramachandran, S.B. Gabriel, M.S. Willis, J.S. Pankow, G.J. Papanicolaou, J.I. Rotter, C.M. Ballantyne, M.D. Gross, G. Lettre, J.G. Wilson, U. Peters, W. Koenig, R.P. Tracy, S. Redline, A.P. Reiner, E.J. Benjamin, and L.A. Lange (2014). Large multiethnic candidate gene study for C-reactive protein levels: identification of a novel association at CD36 in African Americans. Human Genetics 133: 985-995.
• J.M. Simon*, K.E. Hacker*, D. Singh, A.R. Brannon, J.S. Parker, M. Weiser, T.H. Ho, P.F. Kuan, E. Jonasch, T.S. Furey, J.F. Prins, J.D. Lieb, W.K. Rathmell, and I.J. Davis (2014). Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects. Genome Research 24: 241-250.
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2013

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2012

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